Leveraging Transcriptomics Data for Genomic Prediction Models in Cassava (2017)
Lozano, Dunia Pino Del Carpio, Siraj Ismail Kayondo, Teddy Amuge, Ozimati Alfred Adebo, Morag Ferguson, Jean-Luc Jannink biorxiv.
1-Genome-wide association mapping and genomic prediction unravels CBSD resistance in a Manihot esculenta breeding population (2018)
Siraj Ismail Kayondo, Dunia Pino Del Carpio, Roberto Lozano, Alfred Ozimati, Marnin D. Wolfe, Yona Baguma, Vernon Gracen, Offei Samuel, Morag Ferguson, Robert Kawuki, Jean-Luc Jannink. Scientific Reports
2-Prospects for genomic selection in cassava breeding (2017)
Marnin Wolfe, Dunia Pino Del Carpio, Olumide Alabi, Lydia C. Ezenwaka, Ugochukwu N. Ikeogu, Ismail S. Kayondo, Roberto Lozano, Uche G. Okeke, Alfred A. Ozimati, Esuma Williams, Chiedozie Egesi, Robert S. Kawuki, Peter Kulakow, Ismail Y. Rabbi, and Jean-Luc Jannink. The Plant Genome
3- Genome-wide association and prediction reveals the genetic architecture of cassava mosaic disease resistance and prospects for rapid genetic improvement. (2016)
Marnin Wolfe, Ismail Y Rabbi, Chiedozie Egesi, Martha Hamblin, Robert Kawuki, Peter Kulakow, Roberto Lozano, Dunia Pino Del Carpio, Punna Ramu, Jean-Luc Jannink. The Plant Genome.
4- A systems genetics approach identifies gene regulatory networks associated with fatty acid composition in Brassica rapa seed (2015)
Ram Kumar Basnet, Dunia Pino Del Carpio, Dong Xiao, Johan Bucher, Mina Jin, Kerry Boyle, et al. Plant Physiology. pp.15.00853v1-pp.00853.2015.
5-Regulatory Network of Secondary Metabolism in Brassica rapa: Insight Into The Glucosinolate Pathway (2014)
Dunia Pino Del Carpio, Ram Kumar Basnet, Danny Arends, Ke Lin, Ric CH De Vos, Dorota Muth, Jan Kodde, Kim Boutilier, Johan Bucher, Xiaowu Wang, Ritsert Jansen, Richard Visser, Guusje Bonnema. Plos One. DOI: 10.1371/journal.pone.0107123
6-Identification of seed-related QTL in Brassica rapa. (2013)
H Bagheri, D Pino-Del-Carpio, C Hahnart, G Bonnema, J Keurentjes, MGM Aarts. Spanish Journal of Agricultural Research 11 (4), 1085-1093
7-The Brassica rapa FLC homolog BrFLC2 is a key regulator of flowering time, identified through transcriptional co-expression networks. (2013)
D Xiao, JJ Zhao, HL Hou, RK Basnet, DP Carpio, NW Zhang, J Bucher, K Lin, F Cheng, XW Wang, G Bonnema. Journal of experimental botany 64 (14), 4503-16
8-The Patterns of population differentiation in a Brassica rapa Core Collection. (2011)
DP Del Carpio, RK Basnet, RCH De Vos, C Maliepaard, R Visser, G Bonnema. Theoretical and applied genetics 122 (6), 1105-1118
9-Comparative Methods for Association Studies: A Case Study on Metabolite Variation in a Brassica rapa Core Collection. (2011)
DP Del Carpio, RK Basnet, RCH De Vos, C Maliepaard, MJ Paulo, G Bonnema. PloS one 6 (5), e19624
10-Design of a Brassica rapa core collection for association mapping studies. (2010)
J Zhao, A Artemyeva, DP Del Carpio, RK Basnet, N Zhang, J Gao, F Li, et al. Genome 53 (11), 884-898
11-BrFLC2 (FLOWERING LOCUS C) as a candidate gene for a vernalization response QTL in Brassica rapa. (2010)
J Zhao, V Kulkarni, N Liu, DP Del Carpio, J Bucher, G Bonnema Journal of experimental botany 61 (6), 1817-1825
12-Diversity Analysis and Molecular Taxonomy of Brassica Vegetable Crops.
Genetics, Genomics and Breeding of Vegetable Brassicas . Book chapter.
13-Quantitative trait loci for glucosinolate accumulation in Brassica rapa leaves. (2008)
P Lou, J Zhao, H He, C Hanhart, D Pino Del Carpio, R Verkerk, J Custers,et al. New phytologist 179 (4), 1017-1032
14-Quantitative trait loci for flowering time and morphological traits in multiple populations of Brassica rapa. (2007)
P Lou, J Zhao, JS Kim, S Shen, DP Del Carpio, X Song, M Jin, D Vreugdenhill,et al. Journal of Experimental Botany 58 (14), 4005-4016 401